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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015915654.1_cds_XP_016465430.1_58384
CDS Infomation

[gene=LOC107788269] [db_xref=GeneID:107788269] [protein=beta-carotene isomerase D27, chloroplastic-like] [protein_id=XP_016465430.1] [location=complement(join(2632..2681,2769..2864,2964..3070,3212..3273,3649..3741,4851..5315))] [gbkey=CDS]
Sequence

ATGGTGCTACTTAGCATCCAAACTCTTCCCTCTTCATACCCAACTCTCAATAATTACACC
TTTAATTATCGCTCTCAGCGACAAAGCCAGAGCCAAAACCAGAACCAGAACCAGAACCAG
AACCAGAGACGATGTGTGAAAATTCGTAGTAATGTTATCCGATGTGGGATAGCGGAACCA
TCAGGGGAACCAGCACCATTAGGACAGAAGACAAAATACAATGATGGATTGTTTGAGAAG
GCATTCATGACTCTTTTTGCAAGGAAAATGGAGAATTTTGCGGCTAAGTCTGCGAGTAAA
AATGGTTCGCAGAAAGAGGAGAAGAAGAAGGGCTGGTTTGAATATGATTATGATAGTTTT
GTAGATGTGTCGAGGAAAGTAATGCAAGGGAGGTCAAGATTGCAGCAGCAGCAAGTGGTT
CGTGAGGTACTCATGTCAATGCTTCCTCCTGGTGCTCCTGCTCAGTTTAGGAAACTGTTT
CCACCAACGAAATGGGCAGCAGAATTCAATGCCGCAATTACTGTGCCTTTCTTCTTCTGG
TTAGTTGGTCCGTCTGAGGTTGTGGAAGTGGAGATTGATGGGGTAAAGCAGAAAAGTGGG
GTTCACATTAAAAAGTGCAGGTATTTGGAGAACAGTGGGTGTGTAGGAATGTGTGTGAAC
ATGTGCAAAATACCAACACAAGATTTCTTCACAAACGAATTTGGACTTCCATTAACAATG
AATCCAAATTTTGAAGATATGAGTTGTGAAATGGTGTACGGACAAGTACCACCTCCATTT
GAAGAAGATCCAGTGGCCAAACAACCTTGTTTAGCTGATATATGTACCATTGCAAATCCC
AGCTCAAGTTTCTGTCCGAAACTCCAAGCCTAA

Peptide Sequence

PEP ID

XP_016465430.1
PEP Infomation

PREDICTED: beta-carotene isomerase D27, chloroplastic-like [Nicotiana tabacum]
Sequence

MVLLSIQTLPSSYPTLNNYTFNYRSQRQSQSQNQNQNQNQNQRRCVKIRSNVIRCGIAEP
SGEPAPLGQKTKYNDGLFEKAFMTLFARKMENFAAKSASKNGSQKEEKKKGWFEYDYDSF
VDVSRKVMQGRSRLQQQQVVREVLMSMLPPGAPAQFRKLFPPTKWAAEFNAAITVPFFFW
LVGPSEVVEVEIDGVKQKSGVHIKKCRYLENSGCVGMCVNMCKIPTQDFFTNEFGLPLTM
NPNFEDMSCEMVYGQVPPPFEEDPVAKQPCLADICTIANPSSSFCPKLQA

Transcript Sequence

Gene sequence data has not been registered.